track Brown_nono
compositeTrack on
visibility full
shortLabel Brown_nono
longLabel Single-End RNA-Seq PolyA, Mouse Liver, total and nuclear GSE98041
priority 9
type bigWig
subGroup1 prep prep \
	nuc=nuclear \
	tot=total
subGroup2 ZT Timepoints \
	zt00=ZT00 \
	zt02=ZT02 \
	zt04=ZT04 \
	zt06=ZT06 \
	zt08=ZT08 \
 	zt10=ZT10 \
	zt12=ZT12 \
	zt14=ZT14 \
	zt16=ZT16 \
	zt18=ZT18 \
 	zt20=ZT20 \
        zt22=ZT22
subGroup3 cond Condition \
	nonowt=Nono_WT \
	nonoko=Nono_KO 

dimensions dimX=cond dimY=ZT dimA=prep
sortOrder rep=+ ZT=+ dimA=+
dimensionAchecked nuclear
noInherit on

	track nono_KO_ZT16_nuc
	shortLabel nono_KO_ZT16_nuc
	longLabel nono_KO_ZT16_nuc
	parent Brown_nono off
	subGroups prep=nuc ZT=zt16 cond= nonoko
	type bigWig 
	autoScale on
        negateValues on
	color 0,100,0
        altColor 0,100,0
	bigDataUrl http://upnaesrv1.epfl.ch/RNA_star_ben/Brown_nono/SRR5464252.str1.bw
	priority 2

	track nono_KO_ZT16_nuc2
	shortLabel nono_KO_ZT16_nuc2
	longLabel nono_KO_ZT16_nuc2
	parent Brown_nono off
	subGroups prep=nuc ZT=zt16 cond= nonoko
	type bigWig 
	autoScale on
	color 0,100,0
        altColor 0,100,0
	bigDataUrl http://upnaesrv1.epfl.ch/RNA_star_ben/Brown_nono/SRR5464252.str2.bw
	priority 2